RAPDORData
==========

.. currentmodule:: RAPDOR.datastructures

.. autoclass:: RAPDORData
   :members:


   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~RAPDORData.__init__
      ~RAPDORData.calc_all_anosim_value
      ~RAPDORData.calc_all_permanova_f
      ~RAPDORData.calc_all_scores
      ~RAPDORData.calc_anosim_p_value
      ~RAPDORData.calc_distance_stats
      ~RAPDORData.calc_distances
      ~RAPDORData.calc_distribution_features
      ~RAPDORData.calc_mean_distance
      ~RAPDORData.calc_permanova_p_value
      ~RAPDORData.determine_peaks
      ~RAPDORData.determine_strongest_shift
      ~RAPDORData.export_csv
      ~RAPDORData.from_file
      ~RAPDORData.from_files
      ~RAPDORData.from_json
      ~RAPDORData.normalize_and_get_distances
      ~RAPDORData.normalize_array_with_kernel
      ~RAPDORData.pca
      ~RAPDORData.rank_table
      ~RAPDORData.remove_clusters
      ~RAPDORData.run_preprocessing
      ~RAPDORData.to_json
      ~RAPDORData.to_jsons
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~RAPDORData.extra_df
      ~RAPDORData.methods
      ~RAPDORData.raw_lfc
      ~RAPDORData.score_columns