RAPDOR ================================ .. toctree:: :maxdepth: 1 :hidden: installation tutorial api_doc cli -------------------------------------- **R**\ apid **A**\ NOSIM using **P**\ robability **D**\ istance for estimati\ **O**\ n of **R**\ edistribution (RAPDOR) is a package to identify changes in probability distribution profiles originating from two different conditions. The Key idea is to measure a probability distribution for each condition multiple times (replicates) and calculate a probability distance between each measurement. The resulting distance heatmap is used together with treatment labels to evaluate whether the treatment led to a shift in the distribution via either ANOSIM or PERMANOVA. -------------------------------------- .. grid:: 1 1 2 2 :gutter: 3 .. grid-item-card:: :img-top: ../source/_static/DownloadIcon.svg :class-card: on-background border rounded border-light :class-header: text-center font-weight-bold :class-img-top: w-50 Installation ^^^^^^^^^^^^ Get Started and Install RAPDOR +++ .. button-ref:: installation :expand: :color: secondary :click-parent: To installation guide .. grid-item-card:: :img-top: ../source/_static/TutorialIcon.svg :class-card: on-background border rounded border-light :class-header: text-center font-weight-bold :class-img-top: w-50 Tutorial ^^^^^^^^^^^^ Tutorial how to run the Graphical User Interface and how to use python to run python functions separately. +++ .. button-ref:: tutorial :expand: :color: secondary :click-parent: To the tutorial .. grid-item-card:: :img-top: ../source/_static/ConsoleIcon.svg :class-card: on-background border rounded border-light :class-header: text-center font-weight-bold :class-img-top: w-50 Command Line Interface ^^^^^^^^^^^^^^^^^^^^^^ Automatically generated CLI documentation of RAPDOR +++ .. button-ref:: cli :expand: :color: secondary :click-parent: To the CLI Documentation .. grid-item-card:: :img-top: ../source/_static/PythonIcon.svg :class-card: on-background border rounded border-light :class-header: text-center font-weight-bold :class-img-top: w-50 Python API ^^^^^^^^^^^^ Automatically generated API documentation of RAPDOR +++ .. button-ref:: api_doc :expand: :color: secondary :click-parent: To the API Documentation