plot_heatmap

RAPDOR.plots.plot_heatmap(distances, design: pandas.DataFrame, colors=None)

Plots a heatmap of the sample distances

Parameters:

• distances (np.ndarray) – between sample distances of shape num samples x num samples

• design (pd.Dataframe) – the design dataframe to distinguish the groups from the samples dimension

• colors (Iterable[str]) – An iterable of color strings to use for plotting

Returns: go.Figure